CDS
| Accession Number | TCMCG006C85431 |
| gbkey | CDS |
| Protein Id | XP_013686810.1 |
| Location | complement(join(2448064..2448234,2448320..2448431,2448502..2448568,2448658..2448698,2448820..2448912,2449000..2449112,2449180..2449299,2449591..2449733,2449832..2449946,2450229..2450333)) |
| Gene | LOC106390823 |
| GeneID | 106390823 |
| Organism | Brassica napus |
Protein
| Length | 359aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_013831356.2 |
| Definition | cytoplasmic tRNA 2-thiolation protein 1-like [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | J |
| Description | Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03016 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14168
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko04122
[VIEW IN KEGG] map04122 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGAAGCAAGCGAAGGCAAGAGCAAGAAACAAGGAGCCTCTCGCCTCTGCTGCTTATGCAACCAGAGACGTCCTGTCCTCAAACGACCCAAAACACTTCAACAGATATGCAAGGAGTGCTTCTACGAGGTCTTTGAGGAGGAGATTCATCAAGTTATTGTGAAGAATGGTTTATTCAAATCCGGTGAACGTGTTGCTATTGGTGCCTCTGGTGGCAAAGATTCTACAGTACTGGCGTATGTGTTGTCGGAGCTAAACAGACGTCACAGTTACGGGCTAGACCTCTTTCTCTTGTCCATAGATGAAGGGATCACAGGTTACCGTGATGATTCTCTTGAGACCGTTAAAAGAAACGAACTCCAATATGGGTTGCCTCTTCAGATACTTTCATACAAAGATCTGTATGGATGGACAATGGACGACATTGTGAAAATGATCGGTTTGAAGAACAACTGCACCTTCTGTGGTGTCTTCCGTCGACAGGCGCTTGATAGAGGAGCTGCGTTGTTGAAAGTAGATAAGCTAGTCACTGGTCATAACGCGGATGATATAGCAGAAACCGTTCTCTTGAACATCTTGCGTGGGGATATCGCTAGATTAAGTCGGTGTACATCGTTTACTACAGGTGAAGATGGTCCTATTCCAAGATGTAAACCTTTCAAGTATACATACGAGAAGGAGATTGTCATGTATGCTTATTTCAAGAAGCTGGACTACTTCTCCACCGAATGTATATATTCTCCTAATGCGTATCGTGGCTTCGCCCGTGAGTTCATCAAAGATTTGGAGAGACTAAGGCCAAGGGCGATTCTTGACATCATAAAATCTGGTGAAGATTTTAGAATTGCAACAACTACAAAGATGCCTGAGCAAGGGACTTGTGAGCGGTGCGGTTATATATCTAGCCAGAAATGGTGTAAAGCTTGTGTGTTGTTGGATGGACTGAACCGTGGTTTGCCTAAGATGGGTATTGGAAGAGCGAGAGGAGGCGTAAATGGTGATCATCAAAAGGAAACAAAGAAACCTGCATCTGCTGCAAGATCTTTAGAGAGCAAACAATGTGGATCTCTTGATTTCTAA |
| Protein: MEASEGKSKKQGASRLCCLCNQRRPVLKRPKTLQQICKECFYEVFEEEIHQVIVKNGLFKSGERVAIGASGGKDSTVLAYVLSELNRRHSYGLDLFLLSIDEGITGYRDDSLETVKRNELQYGLPLQILSYKDLYGWTMDDIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLVTGHNADDIAETVLLNILRGDIARLSRCTSFTTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERLRPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYISSQKWCKACVLLDGLNRGLPKMGIGRARGGVNGDHQKETKKPASAARSLESKQCGSLDF |